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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
110
ChIP-seq
39
ATAC-seq
30
DNase-seq
Assay category
110
DNA binding
69
DNA accessibility
Target of assay
97
histone
97
histone modification
57
broad histone mark
40
narrow histone mark
13
transcription factor
11
RNA binding protein
Date released
47
April, 2019
40
May, 2024
35
February, 2023
33
June, 2019
15
May, 2019
February, 2021
5
October, 2019
4
July, 2019
Available data
179
bed narrowPeak
166
bigWig
125
bam
111
tsv
94
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
1
bedpe bed3+
1
hic
Organism
179
Homo sapiens
Biosample type
173
tissue
6
primary cell
Organ
440
liver
211
pancreas
203
brain
183
kidney
179
heart
150
epithelium
121
vasculature
117
blood vessel
86
limb
74
connective tissue
62
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
1
pituitary gland
Project
179
AMP
Genome assembly (visualization)
178
GRCh38
101
hg19
Lab
139
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
month_released!
February, 2021
March, 2020
target.investigated_as!
control
BIOSAMPLE
ASSAY
179 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
36
2
left cardiac atrium
40
1
heart left ventricle
29
2
3
heart
12
18
heart right ventricle
11
1
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primary cell
cardiac fibroblast
3
3
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