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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
124
ChIP-seq
47
ATAC-seq
32
DNase-seq
1
FAIRE-seq
Assay category
124
DNA binding
80
DNA accessibility
Target of assay
107
histone
107
histone modification
62
broad histone mark
45
narrow histone mark
17
transcription factor
11
RNA binding protein
Date released
47
April, 2019
40
May, 2024
35
February, 2023
33
June, 2019
18
October, 2019
15
May, 2019
12
February, 2021
4
July, 2019
Available data
239
bigWig
231
bam
204
bed narrowPeak
168
tsv
107
bigBed narrowPeak
34
bed broadPeak
34
bigBed broadPeak
32
bed bed3+
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
5
hic
4
bedpe bed3+
1
tar
Organism
204
Homo sapiens
Biosample type
173
tissue
19
primary cell
12
cell line
Organ
441
liver
214
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
204
AMP
Genome assembly (visualization)
202
GRCh38
126
hg19
Lab
164
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
month_released!
July, 2018
BIOSAMPLE
ASSAY
204 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
3
36
2
left cardiac atrium
40
1
heart left ventricle
29
2
3
heart
12
18
heart right ventricle
11
1
+ See 2 more…
primary cell
endothelial cell of umbilical vein
10
2
1
cardiac fibroblast
3
3
cell line
smooth muscle cell of the coronary artery
4
8
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