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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
52
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
73
DNA binding
62
DNA accessibility
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
8
transcription factor
4
RNA binding protein
Date released
39
May, 2019
35
February, 2023
34
October, 2019
20
February, 2021
5
June, 2019
July, 2019
2
November, 2017
Available data
237
bam
198
bigWig
135
bed narrowPeak
121
tsv
88
txt
79
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
9
bed bed3+
6
tagAlign
4
bed bed3
3
fastq
3
hic
2
bedpe bed3+
1
tar
Organism
135
Homo sapiens
Biosample type
106
tissue
17
primary cell
12
cell line
Organ
441
liver
214
pancreas
202
brain
187
heart
182
kidney
151
epithelium
131
vasculature
127
blood vessel
92
limb
75
connective tissue
73
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
135
AMP
Genome assembly (visualization)
134
GRCh38
99
hg19
Lab
135
AMP-T2D consortium
month_released!
July, 2019
BIOSAMPLE
ASSAY
135 results
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ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
3
35
2
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
+ See 8 more…
primary cell
endothelial cell of umbilical vein
10
2
1
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
cell line
smooth muscle cell of the coronary artery
4
8
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