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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
4
DNase-seq
1
ChIP-seq
Assay category
31
DNA accessibility
1
DNA binding
Target of assay
2
histone
histone modification
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
27
February, 2023
5
June, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
32
Homo sapiens
Biosample type
30
tissue
2
primary cell
Organ
360
liver
153
kidney
94
heart
87
pancreas
67
vasculature
64
blood vessel
63
epithelium
54
artery
53
blood
53
bodily fluid
44
limb
38
connective tissue
36
brain
33
musculature of body
32
eye
18
ureter
11
adipose tissue
8
bone element
8
skeleton
8
spleen
3
embryo
3
nerve
3
vein
0
pituitary gland
Project
32
AMP
Genome assembly (visualization)
32
hg19
5
GRCh38
Lab
32
AMP-T2D consortium
month_released!
November, 2020
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
32 results
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ATAC-seq
DNase-seq
ChIP-seq
tissue
retina
15
3
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
1
1
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