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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
ChIP-seq
5
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
125
DNA binding
10
DNA accessibility
Target of assay
108
histone modification
107
histone
56
broad histone mark
50
narrow histone mark
24
transcription factor
RNA binding protein
3
chromatin remodeller
Date released
278
November, 2017
206
June, 2019
189
October, 2019
135
August, 2017
133
May, 2021
105
August, 2021
92
May, 2019
68
December, 2017
65
February, 2023
62
April, 2019
52
November, 2018
46
September, 2018
38
May, 2022
36
November, 2019
35
May, 2024
34
October, 2018
28
December, 2018
27
May, 2020
23
February, 2021
16
February, 2018
15
January, 2019
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
279
fastq
274
bam
264
bigWig
135
bed narrowPeak
89
tsv
85
tagAlign
40
bigBed narrowPeak
39
bed broadPeak
31
bed bed3+
13
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
129
Homo sapiens
Biosample type
65
tissue
39
in vitro differentiated cells
31
primary cell
Organ
48
pancreas
42
connective tissue
18
liver
17
epithelium
13
musculature of body
3
adipose tissue
Project
135
AMP
Genome assembly (visualization)
135
hg19
112
GRCh38
Lab
135
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
16
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
135 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
17
1
1
liver
17
skeletal muscle tissue
13
pancreas
12
adipose tissue
1
+ See 3 more…
in vitro differentiated cells
adipocyte
38
1
primary cell
skeletal muscle myoblast
12
2
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
See all biosamples
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