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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 132ChIP-seq
  • 5ATAC-seq
  • 4DNase-seq
  • 1FAIRE-seq
Assay category
  • 132DNA binding
  • 10DNA accessibility
Target of assay
  • 108histone modification
  • 107histone
  • 56broad histone mark
  • 50narrow histone mark
  • 24transcription factor
  • 7RNA binding protein
  • 3chromatin remodeller
Date released
  • 313November, 2017
  • 210June, 2019
  • 189October, 2019
  • 142August, 2017
  • 133May, 2021
  • 106August, 2021
  • 97May, 2019
  • 73November, 2018
  • 72December, 2017
  • 65April, 2019
  • 65February, 2023
  • 46September, 2018
  • 45October, 2018
  • 40May, 2024
  • 38May, 2022
  • 37November, 2019
  • 30December, 2018
  • 27May, 2020
  • 23February, 2021
  • 21January, 2019
  • 16February, 2018
  • 12October, 2017
  • 7July, 2019
  • 5September, 2017
  • 3March, 2020
  • 2November, 2020
Available data
  • 287fastq
  • 282bam
  • 272bigWig
  • 142bed narrowPeak
  • 89tsv
  • 85tagAlign
  • 42bigBed narrowPeak
  • 41bed broadPeak
  • 33bed bed3+
  • 15bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 136Homo sapiens
Biosample type
  • 66tissue
  • 43in vitro differentiated cells
  • 33primary cell
Organ
  • 49pancreas
  • 46connective tissue
  • 18liver
  • 17epithelium
  • 13musculature of body
  • 3adipose tissue
Project
  • 142AMP
Genome assembly (visualization)
  • 142hg19
  • 118GRCh38
Lab
  • 142AMP-T2D consortium
Audit category:
  • 1missing controlled_by
Audit category:
  • 16inconsistent control read length
  • 3inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

142 results

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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans1811
liver17
skeletal muscle tissue13
pancreas12
adipose tissue1
in vitro differentiated cells
adipocyte421
primary cell
skeletal muscle myoblast142
pancreatic alpha cell71
pancreatic beta cell71
pancreatic acinar cell1
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