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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ATAC-seq
60
ChIP-seq
Assay category
76
DNA accessibility
60
DNA binding
Target of assay
39
transcription factor
19
histone
19
histone modification
11
narrow histone mark
8
broad histone mark
3
RNA binding protein
2
chromatin remodeller
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
136
bed narrowPeak
123
tsv
83
bam
77
bigWig
64
xls
57
txt
35
fastq
30
bigBed narrowPeak
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
136
Homo sapiens
Biosample type
67
tissue
41
cell line
25
in vitro differentiated cells
3
primary cell
Organ
64
kidney
27
blood
27
bodily fluid
17
liver
3
epithelium
3
spleen
2
connective tissue
Project
136
AMP
Genome assembly (visualization)
120
GRCh38
71
hg19
Lab
64
Katalin Susztak, Upenn
56
AMP-T2D consortium
14
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent control
organ_slims!
gonad
BIOSAMPLE
ASSAY
136 results
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Clear Filters
ATAC-seq
ChIP-seq
tissue
kidney
64
spleen
3
cell line
GM12878
27
HepG2
14
in vitro differentiated cells
neural progenitor cell
10
13
adipocyte
1
osteoblast
1
primary cell
hepatocyte
3
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