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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 76ATAC-seq
  • 30ChIP-seq
Assay category
  • 76DNA accessibility
  • 30DNA binding
Target of assay
  • 19histone
  • 19histone modification
  • 11narrow histone mark
  • 11transcription factor
  • 8broad histone mark
  • 1RNA binding protein
Date released
  • 313November, 2017
  • 210June, 2019
  • 189October, 2019
  • 142August, 2017
  • 133May, 2021
  • 106August, 2021
  • 97May, 2019
  • 73November, 2018
  • 72December, 2017
  • 65April, 2019
  • 65February, 2023
  • 46September, 2018
  • 45October, 2018
  • 40May, 2024
  • 38May, 2022
  • 37November, 2019
  • 30December, 2018
  • 27May, 2020
  • 23February, 2021
  • 21January, 2019
  • 16February, 2018
  • 12October, 2017
  • 7July, 2019
  • 5September, 2017
  • 3March, 2020
  • 2November, 2020
Available data
  • 123tsv
  • 106bed narrowPeak
  • 64xls
  • 57txt
  • 49bam
  • 47bigWig
  • 24tagAlign
  • 5bed bed3+
  • 2bedpe bed3+
  • 2hic
  • 1vcf
Organism
  • 106Homo sapiens
Biosample type
  • 64tissue
  • 25in vitro differentiated cells
  • 14cell line
  • 3primary cell
Organ
  • 64kidney
  • 17liver
  • 3epithelium
  • 2connective tissue
Project
  • 106AMP
Genome assembly (visualization)
  • 90GRCh38
  • 41hg19
Lab
  • 64Katalin Susztak, Upenn
  • 26AMP-T2D consortium
  • 14Bing Ren, UCSD
  • 2Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY

106 results

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Clear Filters
ATAC-seq
ChIP-seq
tissue
kidney64
in vitro differentiated cells
neural progenitor cell1013
adipocyte1
osteoblast1
cell line
HepG214
primary cell
hepatocyte3
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