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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
38
ATAC-seq
Assay category
75
DNA binding
38
DNA accessibility
Target of assay
42
transcription factor
33
histone
33
histone modification
18
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
134
bam
134
zippedFastqFolder
118
fastq
113
bed narrowPeak
112
bigWig
50
bigBed narrowPeak
45
tsv
16
bed bed3+
12
bedpe bed3+
10
hic
7
txt
2
ibed
Organism
113
Homo sapiens
Biosample type
76
tissue
34
in vitro differentiated cells
2
stem cell
1
cell line
Organ
70
liver
21
pancreas
17
epithelium
8
embryo
Project
110
AMP
3
T1D
Genome assembly (visualization)
113
hg19
75
GRCh38
Lab
75
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
27
inconsistent control
3
inconsistent ontology term
Audit category:
11
inconsistent control read length
month_released!
April, 2019
BIOSAMPLE
ASSAY
113 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
liver
29
20
islet of Langerhans
2
18
right lobe of liver
7
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
6
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
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stem cell
hESC
2
cell line
EndoC_BH1
1
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