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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ATAC-seq
51
ChIP-seq
Assay category
65
DNA accessibility
51
DNA binding
Target of assay
42
transcription factor
8
RNA binding protein
8
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
141
fastq
116
bed narrowPeak
64
bam
59
bigWig
51
bigBed narrowPeak
21
tsv
10
bed bed3
7
txt
4
bed bed3+
3
bed bedgraph
Organism
116
Homo sapiens
Biosample type
72
tissue
42
cell line
2
in vitro differentiated cells
Organ
42
blood
42
bodily fluid
35
artery
35
blood vessel
35
heart
35
vasculature
27
eye
12
epithelium
9
spleen
1
adipose tissue
1
connective tissue
Project
116
AMP
Genome assembly (visualization)
86
GRCh38
81
hg19
Lab
114
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent control
1
inconsistent ontology term
BIOSAMPLE
ASSAY
116 results
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Clear Filters
ATAC-seq
ChIP-seq
tissue
coronary artery
35
retina
15
pigmented layer of retina
12
spleen
9
adipose tissue
1
cell line
GM12878
42
in vitro differentiated cells
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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