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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
ChIP-seq
3
DNase-seq
Assay category
33
DNA binding
3
DNA accessibility
Target of assay
48
transcription factor
19
RNA binding protein
recombinant protein
5
chromatin remodeller
Date released
183
November, 2017
50
December, 2017
36
November, 2018
27
May, 2020
20
May, 2022
18
August, 2017
17
August, 2021
6
October, 2019
2
June, 2019
1
February, 2021
0
February, 2023
Available data
37
bam
37
bigWig
37
fastq
36
bed narrowPeak
36
bigBed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
36
Homo sapiens
Biosample type
29
cell line
7
tissue
Organ
36
liver
35
artery
35
blood vessel
35
heart
35
vasculature
27
eye
12
blood
12
bodily fluid
12
epithelium
4
spleen
3
pancreas
2
adipose tissue
2
brain
2
connective tissue
Project
36
AMP
Genome assembly (visualization)
36
GRCh38
36
hg19
Lab
36
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
36 results
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ChIP-seq
DNase-seq
cell line
HepG2
29
tissue
liver
4
2
right lobe of liver
1
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