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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ATAC-seq
6
ChIP-seq
Assay category
36
DNA accessibility
6
DNA binding
Target of assay
6
histone
6
histone modification
5
broad histone mark
1
narrow histone mark
Date released
309
November, 2017
203
June, 2019
155
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
73
November, 2018
72
December, 2017
65
April, 2019
58
May, 2019
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
30
February, 2023
27
May, 2020
21
January, 2019
16
February, 2018
12
October, 2017
11
February, 2021
5
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
93
fastq
42
bed narrowPeak
17
bigWig
16
tsv
15
bam
14
tagAlign
10
bed bed3
7
txt
6
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
3
bed bedgraph
Organism
42
Homo sapiens
Biosample type
40
tissue
2
in vitro differentiated cells
Organ
35
artery
35
blood vessel
35
heart
vasculature
27
eye
12
epithelium
6
brain
4
pancreas
2
adipose tissue
2
connective tissue
1
spleen
Project
42
AMP
Genome assembly (visualization)
42
hg19
12
GRCh38
Lab
40
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
Audit category:
3
missing controlled_by
organ_slims!
vasculature
BIOSAMPLE
ASSAY
42 results
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Clear Filters
ATAC-seq
ChIP-seq
tissue
retina
15
pigmented layer of retina
12
brain
6
body of pancreas
4
adipose tissue
1
+ See 2 more…
in vitro differentiated cells
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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