Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
10
DNase-seq
1
ATAC-seq
1
FAIRE-seq
Assay category
90
DNA binding
12
DNA accessibility
Target of assay
63
transcription factor
27
histone
27
histone modification
27
narrow histone mark
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
313
November, 2017
173
October, 2019
142
August, 2017
133
May, 2021
130
June, 2019
93
May, 2019
73
November, 2018
72
December, 2017
65
February, 2023
47
April, 2019
46
September, 2018
45
October, 2018
42
August, 2021
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
6
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
376
bam
345
bigWig
193
tsv
102
bed narrowPeak
88
fastq
74
bigBed narrowPeak
50
tagAlign
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
102
Homo sapiens
Biosample type
56
cell line
44
tissue
2
primary cell
Organ
78
liver
12
blood
12
bodily fluid
4
spleen
3
connective tissue
3
pancreas
2
brain
1
adipose tissue
Project
102
AMP
Genome assembly (visualization)
100
hg19
93
GRCh38
Lab
102
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
kidney
BIOSAMPLE
ASSAY
102 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
cell line
HepG2
44
GM12878
12
tissue
liver
31
2
spleen
3
1
body of pancreas
2
brain
2
omental fat pad
1
+ See 2 more…
primary cell
osteoblast
1
1
See all biosamples
Download