Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
319
ChIP-seq
6
ATAC-seq
Assay category
319
DNA binding
6
DNA accessibility
Target of assay
236
transcription factor
80
histone
80
histone modification
66
recombinant protein
50
broad histone mark
35
RNA binding protein
30
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
407
bam
348
bigWig
341
fastq
325
bed narrowPeak
318
bigBed narrowPeak
92
tagAlign
74
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
325
Homo sapiens
Biosample type
249
cell line
70
tissue
6
primary cell
Organ
249
liver
70
brain
4
epithelium
4
pancreas
4
vasculature
2
blood vessel
1
adipose tissue
1
connective tissue
1
spleen
Project
325
AMP
Genome assembly (visualization)
292
GRCh38
271
hg19
Lab
325
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
19
inconsistent control read length
4
inconsistent control run_type
month_released!
May, 2019
organ_slims!
ovary
BIOSAMPLE
ASSAY
325 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
249
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
7
+ See 5 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
See all biosamples
Download