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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 174ChIP-seq
  • 8DNase-seq
  • 6ATAC-seq
  • 1FAIRE-seq
Assay category
  • 174DNA binding
  • 15DNA accessibility
Target of assay
  • 167histone
  • 167histone modification
  • 117narrow histone mark
  • 50broad histone mark
  • 7recombinant protein
  • 7transcription factor
Date released
  • 313November, 2017
  • 210June, 2019
  • 189October, 2019
  • 142August, 2017
  • 133May, 2021
  • 106August, 2021
  • 97May, 2019
  • 73November, 2018
  • 72December, 2017
  • 65April, 2019
  • 65February, 2023
  • 46September, 2018
  • 45October, 2018
  • 40May, 2024
  • 38May, 2022
  • 37November, 2019
  • 30December, 2018
  • 27May, 2020
  • 23February, 2021
  • 21January, 2019
  • 16February, 2018
  • 12October, 2017
  • 7July, 2019
  • 5September, 2017
  • 3March, 2020
  • 2November, 2020
Available data
  • 250bam
  • 207bigWig
  • 189bed narrowPeak
  • 70bigBed narrowPeak
  • 49tagAlign
  • 16tsv
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 8bed bed3+
  • 4hic
  • 3bedpe bed3+
  • 1hdf5
  • 1tagAlign bed3+
  • 1tar
Organism
  • 189Homo sapiens
Biosample type
  • 151tissue
  • 21primary cell
  • 15cell line
  • 2in vitro differentiated cells
Organ
  • 75brain
  • 48limb
  • 34blood vessel
  • 34vasculature
  • 27nerve
  • 21artery
  • 21epithelium
  • 16kidney
  • 13vein
  • 7pancreas
  • 6liver
  • 5heart
  • 1pituitary gland
Project
  • 189AMP
Genome assembly (visualization)
  • 189hg19
  • 188GRCh38
Lab
  • 189AMP-T2D consortium
Audit category:
  • 13inconsistent ontology term
BIOSAMPLE
ASSAY

189 results

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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
tissue
tibial nerve2421
tibial artery1821
brain5
heart5
liver5
primary cell
endothelial cell of umbilical vein1021
epithelial cell of proximal tubule6
Heart fetal (cardiac muscle cell)1
Liver fetal (hepatocyte)1
cell line
Panc161
RCC 7860 HIF1a re-expression3
RCC 7860 HIF2a over-expression2
RCC 7860 vector2
glomerular visceral epithelial cell1
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)1
cardiomyocytes (cardiac muscle cell)1
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