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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
38
DNase-seq
12
ATAC-seq
Assay category
55
DNA binding
50
DNA accessibility
Target of assay
50
histone
50
histone modification
34
broad histone mark
16
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
48
October, 2019
33
June, 2019
6
February, 2021
6
May, 2019
5
October, 2018
3
August, 2017
1
February, 2023
1
November, 2018
1
November, 2019
1
October, 2017
Available data
556
bam
516
bigWig
408
tsv
105
bed narrowPeak
94
bigBed narrowPeak
44
fastq
42
bed bed3+
39
bed broadPeak
38
bigBed broadPeak
8
tagAlign
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
Organism
105
Homo sapiens
Biosample type
105
tissue
Organ
418
liver
214
pancreas
203
brain
191
heart
183
kidney
150
epithelium
133
vasculature
129
blood vessel
92
limb
74
artery
73
connective tissue
60
musculature of body
44
blood
44
bodily fluid
33
eye
27
nerve
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
105
AMP
Genome assembly (visualization)
105
hg19
102
GRCh38
Lab
105
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
ureter
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
105 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
24
2
1
tibial artery
18
2
1
muscle of leg
6
13
muscle of arm
17
omental fat pad
3
2
1
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