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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
36
DNase-seq
8
ATAC-seq
Assay category
87
DNA binding
44
DNA accessibility
Target of assay
51
transcription factor
49
histone
49
histone modification
34
broad histone mark
narrow histone mark
10
RNA binding protein
10
chromatin remodeller
Date released
36
October, 2019
32
June, 2019
27
December, 2018
14
January, 2019
12
November, 2018
6
February, 2021
4
May, 2019
Available data
159
bam
131
bed narrowPeak
131
bigWig
123
bigBed narrowPeak
59
fastq
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
131
Homo sapiens
Biosample type
78
tissue
53
cell line
Organ
390
liver
168
kidney
155
pancreas
151
heart
108
vasculature
105
blood vessel
103
epithelium
97
brain
78
limb
68
artery
57
connective tissue
53
blood
53
bodily fluid
49
musculature of body
32
eye
19
nerve
18
ureter
12
spleen
11
adipose tissue
8
bone element
8
skeleton
8
vein
7
embryo
Project
131
AMP
Genome assembly (visualization)
131
GRCh38
131
hg19
Lab
131
AMP-T2D consortium
Audit category:
1
inconsistent control
1
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
131 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
tibial nerve
16
2
1
muscle of arm
17
muscle of leg
4
13
tibial artery
14
2
1
distal epiphysis of femur
1
+ See 7 more…
cell line
GM12878
53
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