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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 170ChIP-seq
  • 32DNase-seq
  • 1FAIRE-seq
Assay category
  • 170DNA binding
  • 33DNA accessibility
Target of assay
  • 167histone
  • 167histone modification
  • 106narrow histone mark
  • 61broad histone mark
  • 3RNA binding protein
  • 3transcription factor
Date released
  • 75October, 2019
  • 64November, 2017
  • 30June, 2019
  • 25May, 2019
  • 6October, 2017
  • 2November, 2018
  • 1July, 2019
Available data
  • 243bam
  • 222bigWig
  • 203bed narrowPeak
  • 127bigBed narrowPeak
  • 118tagAlign
  • 47bed broadPeak
  • 38bigBed broadPeak
  • 35bed bed3+
  • 26tsv
  • 21fastq
  • 3hdf5
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 1bed bed3
  • 1tagAlign bed3+
Organism
  • 203Homo sapiens
Biosample type
  • 192tissue
  • 11primary cell
Organ
  • 441liver
  • 214pancreas
  • 203brain
  • 191heart
  • 183kidney
  • 151epithelium
  • 133vasculature
  • 129blood vessel
  • 92limb
  • 75connective tissue
  • 74artery
  • 60musculature of body
  • 54blood
  • 54bodily fluid
  • 33eye
  • 27nerve
  • 18ureter
  • 14embryo
  • 14spleen
  • 13adipose tissue
  • 13vein
  • 8bone element
  • 8skeleton
  • 1pituitary gland
Project
  • 203AMP
Genome assembly (visualization)
  • 201GRCh38
  • 141hg19
Lab
  • 203AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
Audit category:
  • 3missing controlled_by
BIOSAMPLE
ASSAY

203 results

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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain1114
layer of hippocampus17
angular gyrus14
caudate nucleus121
temporal lobe13
primary cell
astrocyte of the cerebellum21
brain microvascular endothelial cell21
choroid plexus epithelial cell21
astrocyte of the hippocampus1
brain pericyte1
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