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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
2
DNase-seq
1
FAIRE-seq
Assay category
24
DNA binding
3
DNA accessibility
Target of assay
21
histone
21
histone modification
12
narrow histone mark
9
broad histone mark
3
transcription factor
Date released
13
October, 2019
8
December, 2017
6
February, 2018
Available data
56
bam
44
bigWig
27
bed narrowPeak
27
fastq
14
tsv
13
bigBed narrowPeak
5
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
hic
1
bedpe bed3+
1
tar
Organism
27
Homo sapiens
Biosample type
14
in vitro differentiated cells
13
primary cell
Organ
441
liver
214
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
pituitary gland
0
skin of body
Project
27
AMP
Genome assembly (visualization)
27
hg19
26
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
3
inconsistent control read length
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
in vitro differentiated cells
pancreatic endoderm
12
Hepatic endoderm
2
primary cell
endothelial cell of umbilical vein
10
2
1
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