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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 114ChIP-seq
  • 47ATAC-seq
  • 30DNase-seq
Assay category
  • 114DNA binding
  • 77DNA accessibility
Target of assay
  • 97histone
  • 97histone modification
  • 57broad histone mark
  • 40narrow histone mark
  • 17transcription factor
  • 11RNA binding protein
Date released
  • 47April, 2019
  • 40May, 2024
  • 35February, 2023
  • 33June, 2019
  • 15May, 2019
  • 12February, 2021
  • 5October, 2019
  • 4July, 2019
Available data
  • 224bigWig
  • 211bam
  • 191bed narrowPeak
  • 168tsv
  • 94bigBed narrowPeak
  • 30bed bed3+
  • 30bed broadPeak
  • 30bigBed broadPeak
  • 8bed bedMethyl
  • 8bigBed bedMethyl
  • 6tagAlign
  • 3bedpe bed3+
  • 3hic
Organism
  • 191Homo sapiens
Biosample type
  • 173tissue
  • 12cell line
  • 6primary cell
Organ
  • 441liver
  • 214pancreas
  • 203brain
  • 191heart
  • 183kidney
  • 151epithelium
  • 133vasculature
  • 129blood vessel
  • 92limb
  • 75connective tissue
  • 74artery
  • 60musculature of body
  • 54blood
  • 54bodily fluid
  • 33eye
  • 27nerve
  • 18ureter
  • 14embryo
  • 14spleen
  • 13adipose tissue
  • 13vein
  • 8bone element
  • 8skeleton
  • 1pituitary gland
Project
  • 191AMP
Genome assembly (visualization)
  • 190GRCh38
  • 113hg19
Lab
  • 151AMP-T2D consortium
  • 40Patrick T. Ellinor, Broad
Audit category:
  • 4inconsistent ontology term
BIOSAMPLE
ASSAY

191 results

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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery3362
left cardiac atrium401
heart left ventricle2923
heart1218
heart right ventricle111
cell line
smooth muscle cell of the coronary artery48
primary cell
cardiac fibroblast33
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