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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 75ChIP-seq
  • 46ATAC-seq
  • 11DNase-seq
  • 1FAIRE-seq
Assay category
  • 75DNA binding
  • 58DNA accessibility
Target of assay
  • 66histone
  • 66histone modification
  • 41broad histone mark
  • 25narrow histone mark
  • 9transcription factor
  • 5RNA binding protein
Date released
  • 39May, 2019
  • 35February, 2023
  • 34October, 2019
  • 12February, 2021
  • 7June, 2019
  • 4November, 2017
  • 2July, 2019
Available data
  • 185bam
  • 155bigWig
  • 133bed narrowPeak
  • 83bigBed narrowPeak
  • 68tsv
  • 17bed broadPeak
  • 17bigBed broadPeak
  • 13bed bed3+
  • 6fastq
  • 6tagAlign
  • 3hic
  • 2bed bedMethyl
  • 2bedpe bed3+
  • 2bigBed bedMethyl
  • 2hdf5
  • 1tar
Organism
  • 133Homo sapiens
Biosample type
  • 100tissue
  • 21primary cell
  • 12cell line
Organ
  • 441liver
  • 214pancreas
  • 203brain
  • 191heart
  • 183kidney
  • 151epithelium
  • 133vasculature
  • 129blood vessel
  • 92limb
  • 75connective tissue
  • 74artery
  • 60musculature of body
  • 54blood
  • 54bodily fluid
  • 33eye
  • 27nerve
  • 18ureter
  • 14embryo
  • 14spleen
  • 13adipose tissue
  • 13vein
  • 8bone element
  • 8skeleton
  • 1pituitary gland
Project
  • 133AMP
Genome assembly (visualization)
  • 132GRCh38
  • 97hg19
Lab
  • 133AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

133 results

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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery3362
tibial artery1812
ascending aorta131
thoracic aorta121
aorta11
primary cell
endothelial cell of umbilical vein1021
brain microvascular endothelial cell21
choroid plexus epithelial cell21
kidney capillary endothelial cell1
smooth muscle cell of the brain vasculature1
cell line
smooth muscle cell of the coronary artery48
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