Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 420ChIP-seq
Assay category
  • 420DNA binding
Target of assay
  • 851histone modification
  • 850histone
  • 469transcription factor
  • 429narrow histone mark
  • 420broad histone mark
  • 105RNA binding protein
  • 88recombinant protein
  • 36chromatin remodeller
  • 5other context
  • 5other post-translational modification
Date released
  • 64May, 2021
  • 58May, 2019
  • 56August, 2017
  • 50October, 2019
  • 45November, 2017
  • 37April, 2019
  • 20May, 2024
  • 19October, 2018
  • 17September, 2018
  • 15December, 2017
  • 8August, 2021
  • 8February, 2018
  • 8June, 2019
  • 6November, 2019
  • 5October, 2017
  • 4January, 2019
Available data
  • 427bigWig
  • 420bed narrowPeak
  • 378bam
  • 242bigBed narrowPeak
  • 147tagAlign
  • 118fastq
  • 36bed broadPeak
  • 16bigBed broadPeak
  • 12bed bed3+
Organism
  • 416Homo sapiens
Biosample type
  • 253tissue
  • 112primary cell
  • 37in vitro differentiated cells
  • 17cell line
  • 1stem cell
Organ
  • 68pancreas
  • 61brain
  • 57heart
  • 41blood vessel
  • 41vasculature
  • 40epithelium
  • 34limb
  • 29liver
  • 16connective tissue
  • 16musculature of body
  • 16nerve
  • 15kidney
  • 14artery
  • 5vein
  • 4embryo
  • 4spleen
Project
  • 376AMP
  • 44T1D
Genome assembly (visualization)
  • 387GRCh38
  • 363hg19
Lab
  • 335AMP-T2D consortium
  • 64Kyle Gaulton, UCSD
  • 20Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 14inconsistent ontology term
Audit category:
  • 19missing controlled_by
Audit category:
  • 14inconsistent control read length
  • 2inconsistent assembly
BIOSAMPLE
ASSAY

420 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
tissue
left cardiac atrium20
tibial nerve16
heart left ventricle15
tibial artery14
body of pancreas11
kidney10
layer of hippocampus10
liver10
islet of Langerhans9
ascending aorta8
brain8
caudate nucleus8
endocrine pancreas8
germinal matrix8
heart8
pancreas8
skeletal muscle tissue8
substantia nigra8
temporal lobe8
angular gyrus7
aorta7
heart right ventricle7
middle frontal area 467
thoracic aorta7
cingulate gyrus5
muscle of leg4
right atrium auricular region4
spleen4
right cardiac atrium3
right lobe of liver3
primary cell
monocyte44
CD8-positive, alpha-beta T cell20
pancreatic endocrine cell7
pancreatic ductal cell6
skeletal muscle myoblast6
endothelial cell of umbilical vein5
mesenchymal stem cell4
pancreatic acinar cell4
skeletal muscle satellite cell4
epithelial cell of proximal tubule3
pancreatic alpha cell3
pancreatic beta cell3
kidney epithelial cell2
hepatocyte1
in vitro differentiated cells
adipocyte12
hepatocyte7
neural progenitor cell6
pancreatic endoderm4
definitive endodermal cell2
primitive gut cell2
Posterior foregut1
embryonic stem cell1
endocrine cell1
posterior foregut1
cell line
HepG28
EndoC_BH16
Panc13
stem cell
hESC1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego