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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
3
October, 2022
1
March, 2019
Available data
3278
bam
3075
bigWig
bed narrowPeak
1577
tsv
1282
fastq
958
bigBed narrowPeak
398
tagAlign
286
bed broadPeak
249
bigBed broadPeak
233
bed bed3+
154
txt
153
zippedFastqFolder
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
23
bedpe bed3+
23
hic
8
csv
5
hdf5
4
bed bedgraph
4
tar
3
cool
2
bed bed3
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
tissue
Organ
4
pancreas
3
epithelium
Project
3
HPAP
1
AMP
Genome assembly (visualization)
4
hg19
Lab
3
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
3
audit script error
files.file_type!
bed narrowPeak
month_released!
February, 2023
organ_slims!
limb
BIOSAMPLE
ASSAY
4 results
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Hi-C
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
1
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