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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
Hi-C
2
pCHi-C
Assay category
8
3D chromatin structure
Date released
10
March, 2020
3
October, 2022
2
August, 2021
2
November, 2019
2
October, 2019
1
August, 2018
0
August, 2017
Available data
296
bam
290
bigWig
287
fastq
145
bed narrowPeak
129
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
10
bedpe bed3+
8
hic
6
bed bedMethyl
6
bigBed bedMethyl
2
ibed
Organism
10
Homo sapiens
Biosample type
5
tissue
4
in vitro differentiated cells
1
primary cell
Organ
2
blood vessel
heart
2
musculature of body
2
vasculature
1
epithelium
1
liver
1
pancreas
1
vein
Project
10
AMP
Genome assembly (visualization)
10
hg19
Lab
10
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
bed bedgraph
organ_slims!
heart
BIOSAMPLE
ASSAY
10 results
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Hi-C
pCHi-C
tissue
psoas muscle
2
aorta
1
liver
1
pancreas
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
primary cell
endothelial cell of umbilical vein
1
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