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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 3pCHi-C
  • 1Hi-C
Assay category
  • 13D chromatin structure
Date released
  • 2March, 2020
  • 1August, 2018
  • 1August, 2021
Available data
  • 3392bam
  • 3169bigWig
  • 1817bed narrowPeak
  • 1600tsv
  • 1358fastq
  • 1042bigBed narrowPeak
  • 398tagAlign
  • 322bed broadPeak
  • 285bigBed broadPeak
  • 273bed bed3+
  • 161txt
  • 153zippedFastqFolder
  • 64xls
  • 36bed bedMethyl
  • 36bigBed bedMethyl
  • 23bedpe bed3+
  • hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 4Homo sapiens
Biosample type
  • 3in vitro differentiated cells
  • 1tissue
Organ
  • 1adipose tissue
  • 1connective tissue
  • 1pancreas
Project
  • 4AMP
Genome assembly (visualization)
  • 2hg19
Lab
  • 3AMP-T2D consortium
  • 1Bing Ren, UCSD
Audit category:
  • 2inconsistent ontology term
files.file_type!
  • hic
BIOSAMPLE
ASSAY

4 results

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pCHi-C
Hi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)1
lymphocyte of B lineage (iPSC)1
white fat cell1
tissue
islet of Langerhans1
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