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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
3
March, 2020
1
August, 2021
Available data
859
bam
769
bigWig
568
bed narrowPeak
466
fastq
435
bigBed narrowPeak
242
tsv
92
tagAlign
75
bed broadPeak
75
bigBed broadPeak
23
bed bed3+
5
hic
4
bed bedMethyl
4
bedpe bed3+
4
bigBed bedMethyl
4
tar
2
hdf5
1
bed bed3
1
csv
vcf
Organism
4
Homo sapiens
Biosample type
2
tissue
1
cell line
1
primary cell
Organ
7
pancreas
5
epithelium
3
heart
2
blood vessel
2
liver
2
musculature of body
2
vasculature
1
adipose tissue
1
connective tissue
1
vein
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
3
AMP-T2D consortium
1
Bing Ren, UCSD
files.file_type!
vcf
target.investigated_as!
other context
BIOSAMPLE
ASSAY
4 results
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Hi-C
tissue
aorta
1
liver
1
cell line
HepG2
1
primary cell
endothelial cell of umbilical vein
1
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