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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
Assay category
3
3D chromatin structure
Date released
10
March, 2020
3
August, 2021
3
October, 2019
3
October, 2022
2
November, 2019
1
August, 2018
1
March, 2019
1
March, 2023
Available data
243
bam
200
bigWig
184
bed narrowPeak
70
bigBed narrowPeak
49
tagAlign
14
tsv
9
bed broadPeak
9
bigBed broadPeak
8
bed bed3+
3
hic
2
bedpe bed3+
1
hdf5
1
tagAlign bed3+
1
tar
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Organ
1
blood vessel
1
epithelium
heart
1
vasculature
1
vein
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
1
audit script error
month_released!
June, 2018
organ_slims!
heart
BIOSAMPLE
ASSAY
3 results
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Hi-C
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
endothelial cell of umbilical vein
1
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