Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
total RNA-seq
6
WGBS
5
Hi-C
Assay category
10
Transcription
6
DNA methylation
5
3D chromatin structure
Date released
12
August, 2021
6
February, 2021
3
October, 2022
Available data
169
fastq
153
zippedFastqFolder
24
bigWig
16
tsv
14
bed narrowPeak
5
bedpe bed3+
5
hic
3
cool
1
bedpe
1
vcf
Organism
21
Homo sapiens
Biosample type
10
cell line
9
primary cell
2
tissue
Organ
11
pancreas
10
liver
9
epithelium
Project
12
AMP
9
HPAP
Genome assembly (visualization)
4
hg19
Lab
1506
AMP-T2D consortium
96
Kyle Gaulton, UCSD
12
Bing Ren, UCSD
9
Klaus Kaestner, Upenn
Audit category:
3
audit script error
BIOSAMPLE
ASSAY
21 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
WGBS
Hi-C
cell line
HepG2
9
1
primary cell
pancreatic alpha cell
6
1
pancreatic acinar cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
1
1
Download