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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 5Hi-C
Assay category
  • 53D chromatin structure
Date released
  • 3October, 2022
  • 1March, 2020
  • 1November, 2019
Available data
  • 317bam
  • 301bigWig
  • 257fastq
  • 156tsv
  • 151bed narrowPeak
  • 80zippedFastqFolder
  • 76bigBed narrowPeak
  • 22bed broadPeak
  • 22bigBed broadPeak
  • 21bed bed3+
  • 7tagAlign
  • 6bed bedMethyl
  • 6bigBed bedMethyl
  • 6hic
  • 5bedpe bed3+
  • 3cool
  • 2hdf5
  • 1tar
Organism
  • 5Homo sapiens
Biosample type
  • 4primary cell
  • 1cell line
Organ
  • 7pancreas
  • 5epithelium
  • 3heart
  • 2blood vessel
  • 2liver
  • 2musculature of body
  • 2vasculature
  • 1adipose tissue
  • 1connective tissue
  • 1vein
Project
  • 3HPAP
  • 2AMP
Genome assembly (visualization)
  • 5hg19
Lab
  • 3Klaus Kaestner, Upenn
  • 2AMP-T2D consortium
Audit category:
  • 3audit script error
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

5 results

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Hi-C
primary cell
endothelial cell of umbilical vein1
pancreatic acinar cell1
pancreatic alpha cell1
pancreatic beta cell1
cell line
EndoC_BH11
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