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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
15
WGBS
Assay category
30
DNA methylation
Date released
23
July, 2019
7
November, 2018
August, 2017
Available data
2860
bam
2676
bigWig
1485
tsv
1472
bed narrowPeak
1071
fastq
930
bigBed narrowPeak
272
bed broadPeak
264
tagAlign
261
bigBed broadPeak
232
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
3
cool
3
tar
2
ibed
Organism
30
Homo sapiens
Biosample type
20
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
2
brain
2
liver
2
musculature of body
2
spleen
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
limb
1
pericardium
Project
30
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
Lab
30
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
hic
lab.title!
Bing Ren, UCSD
month_released!
August, 2017
October, 2019
BIOSAMPLE
ASSAY
30 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
spleen
2
+ See 8 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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