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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
8
DNase-seq
1
RRBS
Assay category
23
DNA binding
8
DNA accessibility
1
DNA methylation
Target of assay
21
histone
21
histone modification
14
broad histone mark
7
narrow histone mark
2
RNA binding protein
2
transcription factor
Date released
20
October, 2019
8
June, 2019
3
May, 2019
1
July, 2019
Available data
109
bam
107
bed narrowPeak
91
bigWig
63
tsv
31
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
6
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
32
Homo sapiens
Biosample type
28
tissue
4
primary cell
Organ
115
brain
108
kidney
102
heart
85
limb
81
vasculature
78
blood vessel
49
musculature of body
42
epithelium
28
pancreas
26
nerve
25
artery
20
connective tissue
18
ureter
13
vein
7
eye
3
liver
2
adipose tissue
1
pericardium
Project
32
AMP
Genome assembly (visualization)
32
hg19
31
GRCh38
Lab
32
AMP-T2D consortium
files.file_type!
fastq
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
DNase-seq
RRBS
tissue
tibial artery
18
2
coronary artery
3
2
retina
3
primary cell
retinal pigment epithelial cell
2
1
1
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