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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
2
RRBS
1
ChIP-seq
Assay category
3
3D chromatin structure
2
DNA methylation
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
5
July, 2019
1
November, 2017
Available data
bam
222
bigWig
203
bed narrowPeak
127
bigBed narrowPeak
118
tagAlign
47
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
1
tagAlign bed3+
Organism
6
Homo sapiens
Biosample type
4
primary cell
2
tissue
Organ
43
heart
37
liver
24
pancreas
20
epithelium
17
musculature of body
9
connective tissue
6
brain
4
kidney
3
adipose tissue
3
vasculature
2
blood vessel
1
blood
1
bodily fluid
1
embryo
1
eye
1
pericardium
Project
6
AMP
Genome assembly (visualization)
6
hg19
Lab
6
AMP-T2D consortium
files.file_type!
bam
month_released!
October, 2022
BIOSAMPLE
ASSAY
6 results
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Hi-C
RRBS
ChIP-seq
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
choroid plexus epithelial cell
1
tissue
brain
1
cingulate gyrus
1
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