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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
2
DNase-seq
1
ATAC-seq
1
FAIRE-seq
Assay category
66
DNA binding
4
DNA accessibility
Target of assay
51
transcription factor
13
histone
13
histone modification
10
RNA binding protein
10
chromatin remodeller
7
broad histone mark
6
narrow histone mark
Date released
27
December, 2018
15
January, 2019
15
October, 2019
12
November, 2018
1
January, 2018
Available data
80
bam
70
bigWig
67
bed narrowPeak
67
bigBed narrowPeak
60
fastq
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
1
bedpe bed3+
1
tar
0
bigBed bedMethyl
Organism
70
Homo sapiens
Biosample type
55
cell line
15
primary cell
Organ
622
liver
621
pancreas
556
connective tissue
424
adipose tissue
289
epithelium
194
brain
193
heart
149
vasculature
145
blood vessel
83
artery
59
limb
58
bone element
55
blood
55
bodily fluid
55
kidney
31
nerve
30
musculature of body
29
embryo
16
spleen
15
vein
2
pericardium
1
eye
1
pituitary gland
Project
70
AMP
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
1
inconsistent control
month_released!
June, 2019
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
DNase-seq
ATAC-seq
FAIRE-seq
cell line
GM12878
54
1
primary cell
endothelial cell of umbilical vein
12
2
1
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