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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
RRBS
2
ChIP-seq
Assay category
6
DNA methylation
2
DNA binding
Target of assay
2
control
Date released
6
July, 2019
1
August, 2021
1
May, 2021
Available data
317
bam
301
bigWig
257
fastq
156
tsv
bed narrowPeak
80
zippedFastqFolder
76
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
21
bed bed3+
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
8
Homo sapiens
Biosample type
7
primary cell
1
in vitro differentiated cells
Organ
50
liver
37
brain
24
connective tissue
11
pancreas
10
heart
9
adipose tissue
8
epithelium
6
musculature of body
4
kidney
4
vasculature
3
blood vessel
2
artery
2
spleen
1
eye
1
limb
1
pericardium
Project
8
AMP
Genome assembly (visualization)
6
hg19
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed narrowPeak
organ_slims!
esophagus
BIOSAMPLE
ASSAY
8 results
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RRBS
ChIP-seq
primary cell
hepatocyte
1
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
renal cortical epithelial cell
1
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in vitro differentiated cells
pancreatic PP cell
1
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