Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
11
WGBS
1
ChIP-seq
Assay category
28
DNA methylation
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
21
July, 2019
4
August, 2017
3
November, 2018
1
October, 2019
Available data
2261
bam
2121
bigWig
1590
bed narrowPeak
941
bigBed narrowPeak
843
fastq
782
tsv
371
tagAlign
298
bed broadPeak
276
bigBed broadPeak
238
bed bed3+
155
txt
73
zippedFastqFolder
64
xls
28
bed bedMethyl
28
bigBed bedMethyl
16
hic
15
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
hdf5
4
tar
2
ibed
1
tagAlign bed3+
1
vcf
Organism
29
Homo sapiens
Biosample type
18
tissue
10
primary cell
1
cell line
Organ
8
heart
6
epithelium
pancreas
4
kidney
4
musculature of body
3
brain
3
connective tissue
3
liver
adipose tissue
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
29
AMP
Genome assembly (visualization)
18
hg19
12
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
hdf5
organ_slims!
adipose tissue
pancreas
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
RRBS
WGBS
ChIP-seq
tissue
heart left ventricle
1
2
heart right ventricle
2
skeletal muscle tissue
2
spleen
2
aorta
1
+ See 8 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
Download