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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
RRBS
11
WGBS
1
ChIP-seq
Assay category
27
DNA methylation
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
14
July, 2019
7
November, 2018
6
August, 2017
1
October, 2019
Available data
3171
bam
2936
bigWig
1593
bed narrowPeak
1424
tsv
1354
fastq
942
bigBed narrowPeak
392
tagAlign
288
bed broadPeak
251
bigBed broadPeak
239
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
27
bed bedMethyl
27
bigBed bedMethyl
20
hic
19
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
28
Homo sapiens
Biosample type
19
tissue
8
primary cell
1
cell line
Organ
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
brain
3
connective tissue
3
liver
2
adipose tissue
2
spleen
2
vasculature
1
blood vessel
eye
1
limb
1
pericardium
Project
28
AMP
Genome assembly (visualization)
17
hg19
12
GRCh38
Lab
28
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
August, 2018
organ_slims!
eye
heart
BIOSAMPLE
ASSAY
28 results
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Clear Filters
RRBS
WGBS
ChIP-seq
tissue
pancreas
1
2
adipose tissue
2
body of pancreas
2
skeletal muscle tissue
2
spleen
2
+ See 8 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 3 more…
cell line
HepG2
1
See all biosamples
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