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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
9
WGBS
Assay category
26
DNA methylation
Date released
15
July, 2019
7
November, 2018
4
August, 2017
Available data
2569
bam
2358
bigWig
1536
bed narrowPeak
1227
fastq
951
tsv
905
bigBed narrowPeak
370
tagAlign
285
bed broadPeak
249
bigBed broadPeak
219
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
26
bed bedMethyl
26
bigBed bedMethyl
20
hic
19
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
26
Homo sapiens
Biosample type
16
tissue
9
primary cell
1
cell line
Organ
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
26
AMP
Genome assembly (visualization)
17
hg19
9
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
January, 2019
organ_slims!
connective tissue
heart
spinal cord
BIOSAMPLE
ASSAY
26 results
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RRBS
WGBS
tissue
pancreas
1
2
body of pancreas
2
skeletal muscle tissue
2
spleen
2
aorta
1
+ See 6 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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