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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17RRBS
  • 11WGBS
Assay category
  • 28DNA methylation
Date released
  • 15July, 2019
  • 7November, 2018
  • 6August, 2017
Available data
  • 3181bam
  • 2945bigWig
  • 1626bed narrowPeak
  • 1432tsv
  • 1358fastq
  • 948bigBed narrowPeak
  • 392tagAlign
  • 292bed broadPeak
  • 255bigBed broadPeak
  • 243bed bed3+
  • 161txt
  • 153zippedFastqFolder
  • 64xls
  • 28bed bedMethyl
  • 28bigBed bedMethyl
  • 20bedpe bed3+
  • 20hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 28Homo sapiens
Biosample type
  • 18tissue
  • 9primary cell
  • 1cell line
Organ
  • heart
  • 6epithelium
  • 6pancreas
  • 4kidney
  • 4musculature of body
  • 3connective tissue
  • 3liver
  • 2adipose tissue
  • 2brain
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 28AMP
Genome assembly (visualization)
  • 17hg19
  • 11GRCh38
Lab
  • 28AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
organ_slims!
  • heart
BIOSAMPLE
ASSAY

28 results

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Clear Filters
RRBS
WGBS
tissue
pancreas12
adipose tissue2
body of pancreas2
skeletal muscle tissue2
spleen2
primary cell
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
kidney epithelial cell1
cell line
HepG21
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