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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17RRBS
  • 13WGBS
Assay category
  • 30DNA methylation
Date released
  • 21July, 2019
  • 6August, 2017
  • 3November, 2018
Available data
  • 2703bam
  • 2546bigWig
  • 1603bed narrowPeak
  • 1183tsv
  • 951bigBed narrowPeak
  • 887fastq
  • 379tagAlign
  • 301bed broadPeak
  • 278bigBed broadPeak
  • 244bed bed3+
  • 155txt
  • 73zippedFastqFolder
  • 64xls
  • 30bed bedMethyl
  • 30bigBed bedMethyl
  • 16bedpe bed3+
  • 16hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 4hdf5
  • 4tar
  • 2ibed
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 30Homo sapiens
Biosample type
  • 19tissue
  • 10primary cell
  • 1cell line
Organ
  • 8heart
  • 6epithelium
  • pancreas
  • 4kidney
  • 4musculature of body
  • 3connective tissue
  • 3liver
  • 2adipose tissue
  • 2brain
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 30AMP
Genome assembly (visualization)
  • 17hg19
  • 13GRCh38
Lab
  • 30AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • pancreas
BIOSAMPLE
ASSAY

30 results

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Clear Filters
RRBS
WGBS
tissue
heart left ventricle12
adipose tissue2
heart right ventricle2
skeletal muscle tissue2
spleen2
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
cell line
HepG21
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