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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19RRBS
  • 1WGBS
Assay category
  • 20DNA methylation
Date released
  • 15July, 2019
  • 4August, 2017
  • 1November, 2018
Available data
  • 1159bam
  • 1078bigWig
  • 728bed narrowPeak
  • 630fastq
  • 529bigBed narrowPeak
  • 371tsv
  • 142tagAlign
  • 125bed broadPeak
  • 123bigBed broadPeak
  • 107bed bed3+
  • 20bed bedMethyl
  • 20bigBed bedMethyl
  • 13bedpe bed3+
  • 12hic
  • 8txt
  • 7bed bed3
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2csv
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
Organism
  • 20Homo sapiens
Biosample type
  • 10primary cell
  • 9tissue
  • 1cell line
Organ
  • 6epithelium
  • 4kidney
  • 3liver
  • 3musculature of body
  • 2brain
  • 2heart
  • 2pancreas
  • 1connective tissue
  • 1eye
  • 1pericardium
  • 1vasculature
Project
  • 20AMP
Genome assembly (visualization)
  • 19hg19
  • 1GRCh38
Lab
  • 20AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

20 results

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RRBS
WGBS
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
tissue
skeletal muscle tissue2
brain1
heart left ventricle1
islet of Langerhans1
kidney1
cell line
HepG21
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