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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
12
DNase-seq
2
ChIP-seq
Assay category
12
DNA accessibility
2
DNA binding
Target of assay
1
RNA binding protein
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
12
June, 2019
2
November, 2017
Available data
291
bam
278
bigWig
254
fastq
155
tsv
134
bed narrowPeak
80
zippedFastqFolder
59
bigBed narrowPeak
15
bed bed3+
14
bed broadPeak
14
bigBed broadPeak
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
4
bedpe bed3+
4
hic
3
cool
Organism
14
Homo sapiens
Biosample type
14
primary cell
Organ
78
kidney
63
liver
38
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
blood vessel
9
connective tissue
7
pancreas
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
14
AMP
Genome assembly (visualization)
14
GRCh38
9
hg19
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed bed3
txt
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
14 results
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DNase-seq
ChIP-seq
primary cell
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
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