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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
DNase-seq
4
ChIP-seq
Assay category
7
DNA accessibility
4
DNA binding
Target of assay
2
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
7
June, 2019
October, 2019
4
November, 2017
Available data
139
bam
119
bigWig
99
bed narrowPeak
68
tsv
50
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
9
bed bed3+
6
fastq
6
tagAlign
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
hdf5
2
hic
Organism
11
Homo sapiens
Biosample type
8
primary cell
3
tissue
Organ
78
kidney
63
liver
38
brain
33
musculature of body
32
limb
30
heart
18
epithelium
18
ureter
11
vasculature
9
connective tissue
7
blood vessel
6
pancreas
4
eye
2
adipose tissue
2
artery
1
spleen
Project
11
AMP
Genome assembly (visualization)
11
GRCh38
10
hg19
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed bed3
month_released!
October, 2019
BIOSAMPLE
ASSAY
11 results
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DNase-seq
ChIP-seq
primary cell
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
kidney capillary endothelial cell
1
smooth muscle cell of the brain vasculature
1
tissue
coronary artery
2
ascending aorta
1
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