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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
Assay category
39
DNA binding
Target of assay
49
transcription factor
30
histone
30
histone modification
16
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
24
November, 2017
13
August, 2017
2
October, 2019
Available data
974
bigWig
955
bed narrowPeak
887
bam
484
bigBed narrowPeak
321
tagAlign
318
fastq
74
bed broadPeak
39
bigBed broadPeak
27
bed bed3+
1
tagAlign bed3+
1
tar
Organism
39
Homo sapiens
Biosample type
21
primary cell
18
cell line
Organ
18
liver
6
brain
6
epithelium
6
vasculature
4
blood vessel
2
vein
Project
39
AMP
Genome assembly (visualization)
39
hg19
33
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
13
inconsistent control read length
1
inconsistent assembly
files.file_type!
bed bed3
month_released!
September, 2020
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
primary cell
skeletal muscle myoblast
13
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
cell line
HepG2
18
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