Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
DNase-seq
2
ChIP-seq
Assay category
190
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
183
June, 2019
8
October, 2019
1
November, 2020
Available data
2237
bam
2061
bigWig
1183
tsv
1147
bed narrowPeak
556
bigBed narrowPeak
fastq
371
tagAlign
252
bed broadPeak
232
bed bed3+
229
bigBed broadPeak
155
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
16
bedpe bed3+
16
hic
12
bed bed3
8
csv
7
bed bedgraph
4
hdf5
2
ibed
1
tagAlign bed3+
1
tar
1
vcf
Organism
192
Homo sapiens
Biosample type
163
tissue
29
primary cell
Organ
78
kidney
36
limb
33
musculature of body
30
brain
30
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
7
connective tissue
pancreas
4
artery
4
eye
4
vein
2
liver
2
nerve
1
adipose tissue
Project
192
AMP
Genome assembly (visualization)
190
GRCh38
171
hg19
Lab
192
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
fastq
month_released!
January, 2018
organ_slims!
pancreas
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
192 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 34 more…
primary cell
endothelial cell of umbilical vein
2
2
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
See all biosamples
Download