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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
3
small RNA-seq
2
DNase-seq
1
pCHi-C
Assay category
400
Transcription
2
DNA accessibility
Date released
386
February, 2021
12
July, 2019
2
February, 2020
1
June, 2019
1
March, 2020
1
November, 2018
Available data
442
bam
425
bigWig
401
tsv
44
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
403
Homo sapiens
Biosample type
401
tissue
2
primary cell
Organ
487
connective tissue
424
pancreas
403
adipose tissue
237
liver
198
heart
178
epithelium
97
kidney
85
vasculature
blood vessel
64
brain
62
artery
58
bone element
43
limb
42
musculature of body
18
ureter
14
embryo
9
eye
7
nerve
4
vein
2
intestine
2
spleen
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
403
AMP
Genome assembly (visualization)
400
GRCh38
400
hg19
Lab
403
AMP-T2D consortium
files.file_type!
txt
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
403 results
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total RNA-seq
small RNA-seq
DNase-seq
pCHi-C
tissue
adipose tissue
381
1
omental fat pad
5
1
2
subcutaneous adipose tissue
7
1
visceral abdominal adipose tissue
3
primary cell
mesenchymal stem cell of adipose
1
1
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