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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 52ChIP-seq
  • 1DNase-seq
Assay category
  • 52DNA binding
  • 1DNA accessibility
Target of assay
  • 37transcription factor
  • 15histone
  • 15histone modification
  • 9broad histone mark
  • 6narrow histone mark
  • 3chromatin remodeller
  • 1RNA binding protein
  • 1other context
  • 1other post-translational modification
Date released
  • 44November, 2017
  • 9August, 2017
Available data
  • 142fastq
  • 137bam
  • 113bigWig
  • 94bed narrowPeak
  • 64bigBed narrowPeak
  • 53bed broadPeak
  • 53bigBed broadPeak
  • 16tagAlign
  • 9tsv
  • 4bed bedMethyl
  • 4bigBed bedMethyl
  • 3bed bed3+
Organism
  • 53Homo sapiens
Biosample type
  • 44cell line
  • 9primary cell
Organ
  • 44liver
Project
  • 53AMP
Genome assembly (visualization)
  • 53hg19
  • 43GRCh38
Lab
  • 53AMP-T2D consortium
Audit category:
  • 7inconsistent control read length
BIOSAMPLE
ASSAY

53 results

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ChIP-seq
DNase-seq
cell line
HepG244
primary cell
skeletal muscle myoblast81
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