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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 6ChIP-seq
  • 4DNase-seq
Assay category
  • 6DNA binding
  • 4DNA accessibility
Target of assay
  • 5transcription factor
  • 1RNA binding protein
  • 1broad histone mark
  • 1chromatin remodeller
  • 1histone
  • 1histone modification
Date released
  • 6November, 2017
  • 2August, 2017
  • 2November, 2018
Available data
  • 562fastq
  • 560bam
  • 482bigWig
  • 283bed narrowPeak
  • 244bigBed narrowPeak
  • 163tsv
  • 17bed broadPeak
  • 14bed bed3+
  • 11tagAlign
  • 10bigBed broadPeak
Organism
  • 10Homo sapiens
Biosample type
  • 6cell line
  • 2tissue
  • 1in vitro differentiated cells
  • 1primary cell
Organ
  • 7liver
  • 1brain
  • 1connective tissue
Project
  • 10AMP
Genome assembly (visualization)
  • 10hg19
  • 5GRCh38
Lab
  • 10AMP-T2D consortium
Audit category:
  • 2inconsistent control read length
BIOSAMPLE
ASSAY

10 results

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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG26
tissue
brain1
liver1
in vitro differentiated cells
adipocyte1
primary cell
skeletal muscle myoblast1
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