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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
DNase-seq
6
ChIP-seq
Assay category
195
DNA accessibility
6
DNA binding
Target of assay
4
transcription factor
2
broad histone mark
2
histone
2
histone modification
Date released
187
June, 2019
9
October, 2019
4
November, 2017
1
November, 2020
Available data
3134
bam
2954
bigWig
1617
bed narrowPeak
1600
tsv
1094
fastq
894
bigBed narrowPeak
359
tagAlign
236
bed bed3+
229
bed broadPeak
201
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
201
Homo sapiens
Biosample type
167
tissue
29
primary cell
5
cell line
Organ
78
kidney
36
limb
33
musculature of body
30
brain
30
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
7
connective tissue
6
liver
5
pancreas
4
artery
4
eye
4
vein
2
nerve
1
adipose tissue
Project
201
AMP
Genome assembly (visualization)
195
GRCh38
178
hg19
Lab
201
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.read_length!
36
BIOSAMPLE
ASSAY
201 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 36 more…
primary cell
endothelial cell of umbilical vein
2
2
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
HepG2
4
Panc1
1
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