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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
196
DNase-seq
79
ChIP-seq
Assay category
196
DNA accessibility
79
DNA binding
Target of assay
49
transcription factor
30
histone
30
histone modification
16
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
187
June, 2019
64
November, 2017
13
August, 2017
9
October, 2019
1
November, 2018
1
November, 2020
Available data
3019
bam
2851
bigWig
1637
bed narrowPeak
1454
tsv
903
fastq
895
bigBed narrowPeak
398
tagAlign
310
bed broadPeak
275
bigBed broadPeak
265
bed bed3+
155
txt
64
xls
31
bed bedMethyl
31
bigBed bedMethyl
23
hic
22
bedpe bed3+
18
zippedFastqFolder
12
bed bed3
7
bed bedgraph
6
csv
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
275
Homo sapiens
Biosample type
168
tissue
59
cell line
48
primary cell
Organ
78
kidney
60
liver
37
brain
36
limb
33
musculature of body
30
heart
22
epithelium
18
ureter
17
vasculature
13
blood vessel
7
connective tissue
5
pancreas
4
artery
4
eye
4
vein
2
nerve
1
adipose tissue
Project
275
AMP
Genome assembly (visualization)
258
GRCh38
252
hg19
Lab
275
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
13
inconsistent control read length
1
inconsistent assembly
files.run_type!
paired-ended
BIOSAMPLE
ASSAY
275 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
brain
13
kidney
13
muscle of leg
13
+ See 36 more…
cell line
HepG2
58
Panc1
1
primary cell
skeletal muscle myoblast
13
endothelial cell of umbilical vein
2
2
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
cardiac fibroblast
3
+ See 18 more…
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