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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
DNase-seq
2
ChIP-seq
Assay category
16
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
14
June, 2019
November, 2017
4
October, 2019
Available data
306
bam
288
bigWig
251
fastq
151
tsv
147
bed narrowPeak
80
zippedFastqFolder
72
bigBed narrowPeak
19
bed bed3+
18
bed broadPeak
18
bigBed broadPeak
7
tagAlign
6
hic
5
bedpe bed3+
3
cool
1
tar
Organism
18
Homo sapiens
Biosample type
18
primary cell
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
epithelium
18
ureter
13
vasculature
11
blood vessel
9
connective tissue
7
pancreas
5
liver
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
18
AMP
Genome assembly (visualization)
16
GRCh38
12
hg19
Lab
18
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2019
November, 2017
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
18 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
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